KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:22:05 2014 Check: 00 .. Name: ENSTTRP00000010038/1-299 Len: 359 Check: 3391 Weight: 1.00 Name: bmy_09182T0/1-337 Len: 359 Check: 5620 Weight: 1.00 Name: ENSBTAP00000003788/1-339 Len: 359 Check: 2394 Weight: 1.00 Name: ENSP00000372088/1-340 Len: 359 Check: 9210 Weight: 1.00 Name: BACU008527/1-130 Len: 359 Check: 1209 Weight: 1.00 // 1 50 ENSTTRP00000010038/1-299 MAMQMQLEAN ADTSVEEESF GPQPISRLEQ CGIHANDVKK LEEAGFHTVE bmy_09182T0/1-337 MAMQMQLEAN ADTSVEEESF GPQPISRL-- ---------- ---------E ENSBTAP00000003788/1-339 MAMQMQLEAN ADTSVEEESF GPQPISRLEQ CGINANDVKK LEEAGFHTVE ENSP00000372088/1-340 MAMQMQLEAN ADTSVEEESF GPQPISRLEQ CGINANDVKK LEEAGFHTVE BACU008527/1-130 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000010038/1-299 AVAYAPKKEL INIKGISEAK ADKIL----- ---------- ---------- bmy_09182T0/1-337 AVAYAPKKEL INIKGISEAK ADKILTEAAK LVPMGFTTAT -EFHQRRSEI ENSBTAP00000003788/1-339 AVAYAPKKEL INIKGISEAK ADKILTEAAK LVPMGFTTAT -EFHQRRSEI ENSP00000372088/1-340 AVAYAPKKEL INIKGISEAK ADKILTESRS VARLECNSVI LVYCTLRLSG BACU008527/1-130 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000010038/1-299 ---------- ------GIET GSITEMFGEF RTGKTQICHT LAVTCQLPID bmy_09182T0/1-337 IQITTGSKEL DKLLQGGIET GSITEMFGEF RTGKTQICHT LAVTCQLPID ENSBTAP00000003788/1-339 IQITTGSKEL DKLLQGGIET GSITEMFGEF RTGKTQICHT LAVTCQLPID ENSP00000372088/1-340 SSDSPASASR VVGTTGGIET GSITEMFGEF RTGKTQICHT LAVTCQLPID BACU008527/1-130 ---------- ---------- ---------- ---------- ---------- 151 200 ENSTTRP00000010038/1-299 RGGGEGKAMY IDTEGTFRPE RLLAVAERYG LSGSDVLDNV AYARGFNTDH bmy_09182T0/1-337 RGGGEGKAMY IDTEGTFRPE RLLAVAERYG LSGSDVLDNV AYARGFNTDH ENSBTAP00000003788/1-339 RGGGEGKAMY IDTEGTFRPE RLLAVAERYG LSGSDVLDNV AYARGFNTDH ENSP00000372088/1-340 RGGGEGKAMY IDTEGTFRPE RLLAVAERYG LSGSDVLDNV AYARAFNTDH BACU008527/1-130 ---------- ---------- ---------- ---------- ---------- 201 250 ENSTTRP00000010038/1-299 QTQLLYQASA MM-------- ---------- -VESRYALLI VDSATALYRT bmy_09182T0/1-337 QTQLLYQASA MMGSGKEQNL TWARNRLQRI RVPCRYALLI VDSATALYRT ENSBTAP00000003788/1-339 QTQLLYQASA MM-------- ---------- -VESRYALLI VDSATALYRT ENSP00000372088/1-340 QTQLLYQASA MM-------- ---------- -VESRYALLI VDSATALYRT BACU008527/1-130 ---------- MM-------- ---------- -VESRYALLI VDSATALYRT 251 300 ENSTTRP00000010038/1-299 DYSGRGELSA RQMHLARFLR MLLRLADEFG VAVVITNQVV AQVDGAAMFA bmy_09182T0/1-337 DYSGRGELSA RQMHLARFLR MLLRLADEFG VAVVITNQVV AQVDGAAMFA ENSBTAP00000003788/1-339 DYSGRGELSA RQMHLARFLR MLLRLADEFG VAVVITNQVV AQVDGAAMFA ENSP00000372088/1-340 DYSGRGELSA RQMHLARFLR MLLRLADEFG VAVVITNQVV AQVDGAAMFA BACU008527/1-130 DYSGRGELSA RQMHLARFLR MLLRLADEFG VAVVITNQVV AQVDGAAMFA 301 350 ENSTTRP00000010038/1-299 ADPKKPIGGX XXXXXXXXXL YLRKGRGETR ICKIYDSPCL PEAEAMFAIN bmy_09182T0/1-337 ADPKKPIGGN IIAHASTTRL YLRKGRGETR ICKIYDSPCL PEAEAMFAIN ENSBTAP00000003788/1-339 ADPKKPIGGN IIAHASTTRL YLRKGRGETR ICKIYDSPCL PEAEAMFAIN ENSP00000372088/1-340 ADPKKPIGGN IIAHASTTRL YLRKGRGETR ICKIYDSPCL PEAEAMFAIN BACU008527/1-130 ADPKKPIGGN IIAHASTTRL YLRKGRGETR ICKIYDSPCL PEAEAMFAIN 351 400 ENSTTRP00000010038/1-299 ADGVGDAKD bmy_09182T0/1-337 ADGVGDAKD ENSBTAP00000003788/1-339 ADGVGDAKD ENSP00000372088/1-340 ADGVGDAKD BACU008527/1-130 ADGVGDAKD